Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
PHF1O43189 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.24□□□□□ -0.29
PHF1O43189 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
PHF1O43189 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.24□□□□□ -0.29
PHF1O43189 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.24□□□□□ -0.29
PHF1O43189 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PHF1O43189 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.24□□□□□ -0.29
PHF1O43189 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.24□□□□□ -0.29
PHF1O43189 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.24□□□□□ -0.29
PHF1O43189 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
PHF1O43189 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
PHF1O43189 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PHF1O43189 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.23□□□□□ -0.29
PHF1O43189 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.23□□□□□ -0.29
PHF1O43189 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.23□□□□□ -0.29
PHF1O43189 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
PHF1O43189 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.23□□□□□ -0.29
PHF1O43189 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
PHF1O43189 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
PHF1O43189 AC092506.1-202ENST00000401022 528 ntBASIC13.23□□□□□ -0.29
PHF1O43189 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.23□□□□□ -0.29
PHF1O43189 AC114501.2-201ENST00000439631 535 ntBASIC13.23□□□□□ -0.29
PHF1O43189 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.23□□□□□ -0.29
PHF1O43189 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.23□□□□□ -0.29
PHF1O43189 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.23□□□□□ -0.29
PHF1O43189 AC004790.1-201ENST00000612686 536 ntBASIC13.23□□□□□ -0.29
PHF1O43189 MIR6869-201ENST00000619434 62 ntBASIC13.23□□□□□ -0.29
PHF1O43189 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 AC138969.2-201ENST00000532739 9932 ntBASIC13.23□□□□□ -0.29
PHF1O43189 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.23□□□□□ -0.29
PHF1O43189 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
PHF1O43189 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
PHF1O43189 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.23□□□□□ -0.29
PHF1O43189 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
PHF1O43189 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
PHF1O43189 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
PHF1O43189 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PHF1O43189 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF1O43189 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.22□□□□□ -0.29
PHF1O43189 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF1O43189 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.22□□□□□ -0.29
PHF1O43189 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.22□□□□□ -0.29
PHF1O43189 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
PHF1O43189 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms