Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 CICP4-201ENST00000447359 2812 ntBASIC16.12■□□□□ 0.17
CAPN9O14815 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CAPN9O14815 AC104581.4-201ENST00000623126 3052 ntBASIC16.12■□□□□ 0.17
CAPN9O14815 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 AL109954.1-202ENST00000564051 2148 ntBASIC16.12■□□□□ 0.17
CAPN9O14815 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CAPN9O14815 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN9O14815 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CAPN9O14815 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN9O14815 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 OR2I1P-210ENST00000642037 4691 ntBASIC16.11■□□□□ 0.17
CAPN9O14815 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN9O14815 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN9O14815 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN9O14815 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CAPN9O14815 ATP5G2P4-201ENST00000442175 420 ntBASIC16.11■□□□□ 0.17
CAPN9O14815 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN9O14815 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN9O14815 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.11■□□□□ 0.17
CAPN9O14815 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN9O14815 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 SAMD11P1-201ENST00000571429 661 ntBASIC16.11■□□□□ 0.17
CAPN9O14815 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.11■□□□□ 0.17
CAPN9O14815 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN9O14815 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN9O14815 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CAPN9O14815 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN9O14815 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CAPN9O14815 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CAPN9O14815 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.11■□□□□ 0.17
CAPN9O14815 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CAPN9O14815 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CAPN9O14815 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.11■□□□□ 0.17
CAPN9O14815 CU639417.3-201ENST00000624240 1404 ntBASIC16.11■□□□□ 0.17
CAPN9O14815 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CAPN9O14815 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CAPN9O14815 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN9O14815 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CAPN9O14815 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN9O14815 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CAPN9O14815 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CAPN9O14815 AC026748.1-201ENST00000624349 3251 ntBASIC16.1■□□□□ 0.17
CAPN9O14815 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CAPN9O14815 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CAPN9O14815 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.1■□□□□ 0.17
CAPN9O14815 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.1■□□□□ 0.17
CAPN9O14815 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.1■□□□□ 0.17
CAPN9O14815 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN9O14815 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CAPN9O14815 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.1■□□□□ 0.17
CAPN9O14815 BX539320.1-201ENST00000623759 877 ntBASIC16.1■□□□□ 0.17
CAPN9O14815 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN9O14815 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CAPN9O14815 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CAPN9O14815 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.1■□□□□ 0.17
CAPN9O14815 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CAPN9O14815 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CAPN9O14815 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CAPN9O14815 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.1■□□□□ 0.17
CAPN9O14815 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CAPN9O14815 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.09■□□□□ 0.17
CAPN9O14815 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms