Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 CICP16-201ENST00000502609 2813 ntBASIC16.16■□□□□ 0.18
RCCD1A6NED2 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RCCD1A6NED2 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.16■□□□□ 0.18
RCCD1A6NED2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 AGGF1P1-201ENST00000509500 2073 ntBASIC16.15■□□□□ 0.18
RCCD1A6NED2 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 AC016397.2-201ENST00000624848 1985 ntBASIC16.15■□□□□ 0.18
RCCD1A6NED2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 AL035696.2-201ENST00000407941 709 ntBASIC16.15■□□□□ 0.18
RCCD1A6NED2 KRT8P14-201ENST00000414254 1442 ntBASIC16.15■□□□□ 0.18
RCCD1A6NED2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 AC004066.1-201ENST00000502488 802 ntBASIC16.15■□□□□ 0.18
RCCD1A6NED2 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.15■□□□□ 0.18
RCCD1A6NED2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RCCD1A6NED2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 AL139400.1-201ENST00000366220 510 ntBASIC16.14■□□□□ 0.17
RCCD1A6NED2 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 AL158212.4-201ENST00000624062 1286 ntBASIC16.14■□□□□ 0.17
RCCD1A6NED2 AC004461.2-201ENST00000629517 803 ntBASIC16.14■□□□□ 0.17
RCCD1A6NED2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RCCD1A6NED2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.14■□□□□ 0.17
RCCD1A6NED2 CLK3P2-201ENST00000427566 1453 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms