Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 AL022328.1-201ENST00000610050 478 ntBASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 LINC00552-201ENST00000625151 2579 ntBASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPDC1A2A3K4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 FAM45BP-202ENST00000592932 1624 ntBASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 KRT223P-202ENST00000449164 1292 ntBASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 AC119751.2-201ENST00000504529 210 ntBASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 AC104989.1-201ENST00000519711 778 ntBASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 AP005482.1-201ENST00000563722 1273 ntBASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 CLUHP6-201ENST00000580789 941 ntBASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 COX11-210ENST00000639671 696 ntBASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPDC1A2A3K4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 ANKRD19P-201ENST00000338192 862 ntBASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 AC107373.2-201ENST00000607735 490 ntBASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 AC005252.2-201ENST00000624630 1141 ntBASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 AC063926.3-201ENST00000624734 5658 ntBASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 DRD5P1-201ENST00000456605 1438 ntBASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PTPDC1A2A3K4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms