Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC007326.2-201ENST00000624224 7579 ntBASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.4□□□□□ -0.26
TRDV1A0A1B0GX56 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
TRDV1A0A1B0GX56 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRDV1A0A1B0GX56 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 RN7SL589P-201ENST00000481268 310 ntBASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 LINC01225-203ENST00000563550 1244 ntBASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 Z83851.2-201ENST00000609564 659 ntBASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRDV1A0A1B0GX56 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 KRT18P2-201ENST00000447938 1258 ntBASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 KRT8P23-201ENST00000560090 1207 ntBASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 COL6A4P2-202ENST00000504443 2753 ntBASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRDV1A0A1B0GX56 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms