Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 CR769767.2-201ENST00000622735 460 ntBASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 F2-205ENST00000530231 1849 ntTSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 PKP4P1-201ENST00000426801 2158 ntBASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 AGAP10P-201ENST00000454844 2418 ntBASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AL583810.2-201ENST00000556430 3254 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AC026271.4-201ENST00000578214 1833 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AC115284.2-201ENST00000624646 2054 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 ACTG1P4-201ENST00000425123 1122 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 MTCL1P1-201ENST00000446207 792 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AC093787.1-201ENST00000450396 207 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AP001330.3-201ENST00000520123 633 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AC131281.2-201ENST00000520478 145 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 ABHD17AP5-201ENST00000580133 923 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AC009955.4-201ENST00000597192 544 ntBASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LINC01558Q9Y6Z2 AL354702.1-201ENST00000442006 1960 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms