Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 SPDYE22P-201ENST00000582158 798 ntBASIC17.34■□□□□ 0.37
CLIC4Q9Y696 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.34■□□□□ 0.37
CLIC4Q9Y696 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC4Q9Y696 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC4Q9Y696 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC4Q9Y696 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.33■□□□□ 0.37
CLIC4Q9Y696 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.33■□□□□ 0.37
CLIC4Q9Y696 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC4Q9Y696 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC4Q9Y696 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC4Q9Y696 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC4Q9Y696 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLIC4Q9Y696 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 CYMP-203ENST00000474680 1263 ntBASIC17.33■□□□□ 0.36
CLIC4Q9Y696 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLIC4Q9Y696 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 KRT8P14-201ENST00000414254 1442 ntBASIC17.32■□□□□ 0.36
CLIC4Q9Y696 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 SLC7A15P-201ENST00000424028 1363 ntBASIC17.32■□□□□ 0.36
CLIC4Q9Y696 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 AL645937.2-201ENST00000396808 931 ntBASIC17.32■□□□□ 0.36
CLIC4Q9Y696 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 AC098850.1-201ENST00000419919 790 ntBASIC17.32■□□□□ 0.36
CLIC4Q9Y696 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 AC120045.2-201ENST00000567334 178 ntBASIC17.32■□□□□ 0.36
CLIC4Q9Y696 AC093813.1-201ENST00000605066 256 ntBASIC17.32■□□□□ 0.36
CLIC4Q9Y696 PRSS30P-206ENST00000641773 873 ntBASIC17.32■□□□□ 0.36
CLIC4Q9Y696 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLIC4Q9Y696 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 INTS4P2-202ENST00000614726 2019 ntBASIC17.31■□□□□ 0.36
CLIC4Q9Y696 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC4Q9Y696 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms