Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 AC055811.4-201ENST00000624039 1754 ntBASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 AL162274.1-201ENST00000617191 1098 ntBASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 AL513477.1-201ENST00000602865 2407 ntBASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGC4Q9Y5F7 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGC4Q9Y5F7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PCDHGC4Q9Y5F7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
PCDHGC4Q9Y5F7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDHGC4Q9Y5F7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.33■□□□□ 0.05
PCDHGC4Q9Y5F7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGC4Q9Y5F7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGC4Q9Y5F7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGC4Q9Y5F7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGC4Q9Y5F7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGC4Q9Y5F7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGC4Q9Y5F7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.33■□□□□ 0.05
PCDHGC4Q9Y5F7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGC4Q9Y5F7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 FTH1P14-201ENST00000482930 551 ntBASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 AC106886.1-201ENST00000568660 600 ntBASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 GNRHR2-203ENST00000581100 1187 ntBASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGC4Q9Y5F7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 AL138709.1-201ENST00000614840 1693 ntBASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGC4Q9Y5F7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms