Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 AL391825.1-201ENST00000457671 1364 ntBASIC14□□□□□ -0.17
TRAPPC4Q9Y296 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 AC092135.3-201ENST00000624151 1846 ntBASIC14□□□□□ -0.17
TRAPPC4Q9Y296 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 OSM-203ENST00000403463 464 ntTSL 3 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 AL589987.1-201ENST00000453380 819 ntBASIC14□□□□□ -0.17
TRAPPC4Q9Y296 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 AC099568.2-201ENST00000609194 695 ntBASIC14□□□□□ -0.17
TRAPPC4Q9Y296 AL158212.4-201ENST00000624062 1286 ntBASIC14□□□□□ -0.17
TRAPPC4Q9Y296 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14□□□□□ -0.17
TRAPPC4Q9Y296 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 AC036164.1-201ENST00000570544 333 ntBASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAPPC4Q9Y296 CICP17-201ENST00000418553 2377 ntBASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms