Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 FAM207CP-201ENST00000443486 507 ntBASIC12.34□□□□□ -0.43
FOXA2Q9Y261 TSPY16P-201ENST00000449843 468 ntBASIC12.34□□□□□ -0.43
FOXA2Q9Y261 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 AC004840.1-201ENST00000636359 365 ntBASIC12.34□□□□□ -0.43
FOXA2Q9Y261 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
FOXA2Q9Y261 AC138969.3-201ENST00000546612 1459 ntBASIC12.34□□□□□ -0.43
FOXA2Q9Y261 AC138932.2-201ENST00000548268 1459 ntBASIC12.34□□□□□ -0.43
FOXA2Q9Y261 AC126755.4-201ENST00000549796 1459 ntBASIC12.34□□□□□ -0.43
FOXA2Q9Y261 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.33□□□□□ -0.43
FOXA2Q9Y261 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
FOXA2Q9Y261 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
FOXA2Q9Y261 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.33□□□□□ -0.43
FOXA2Q9Y261 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
FOXA2Q9Y261 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
FOXA2Q9Y261 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 MEP1AP4-201ENST00000423244 1087 ntBASIC12.33□□□□□ -0.44
FOXA2Q9Y261 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 HMGN1P19-201ENST00000436976 333 ntBASIC12.33□□□□□ -0.44
FOXA2Q9Y261 MEIS3P1-201ENST00000495167 958 ntBASIC12.33□□□□□ -0.44
FOXA2Q9Y261 DOC2GP-202ENST00000514950 1163 ntBASIC12.33□□□□□ -0.44
FOXA2Q9Y261 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 SRD5A3P1-201ENST00000603021 949 ntBASIC12.33□□□□□ -0.44
FOXA2Q9Y261 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 AF228730.6-201ENST00000641497 218 ntBASIC12.33□□□□□ -0.44
FOXA2Q9Y261 AC084121.3-201ENST00000641716 218 ntBASIC12.33□□□□□ -0.44
FOXA2Q9Y261 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
FOXA2Q9Y261 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms