Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 SALL4P5-201ENST00000419001 1760 ntBASIC20.32■□□□□ 0.84
PHF8Q9UPP1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 ZBED1P1-201ENST00000502364 1930 ntBASIC20.32■□□□□ 0.84
PHF8Q9UPP1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AL627422.1-201ENST00000434104 580 ntBASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AC012362.1-201ENST00000434906 739 ntBASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AL161773.1-201ENST00000624845 863 ntBASIC20.32■□□□□ 0.84
PHF8Q9UPP1 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AC092299.1-201ENST00000632679 757 ntBASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AC099398.1-201ENST00000567919 2776 ntBASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AC023090.2-201ENST00000625182 2110 ntBASIC20.32■□□□□ 0.84
PHF8Q9UPP1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 AC018629.1-201ENST00000623381 1736 ntBASIC20.31■□□□□ 0.84
PHF8Q9UPP1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 BANF1P3-201ENST00000412556 261 ntBASIC20.31■□□□□ 0.84
PHF8Q9UPP1 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 CHCHD2P9-201ENST00000461726 456 ntBASIC20.31■□□□□ 0.84
PHF8Q9UPP1 AC131206.1-201ENST00000538078 1211 ntBASIC20.31■□□□□ 0.84
PHF8Q9UPP1 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 VPS18-202ENST00000558474 873 ntTSL 3 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 AC093752.3-201ENST00000567343 901 ntBASIC20.31■□□□□ 0.84
PHF8Q9UPP1 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC20.31■□□□□ 0.84
PHF8Q9UPP1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 KRT18P36-201ENST00000411618 1276 ntBASIC20.3■□□□□ 0.84
PHF8Q9UPP1 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 RPSAP15-201ENST00000448168 861 ntBASIC20.3■□□□□ 0.84
PHF8Q9UPP1 DUTP3-201ENST00000450025 415 ntBASIC20.3■□□□□ 0.84
PHF8Q9UPP1 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PHF8Q9UPP1 AC127024.7-201ENST00000625101 200 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms