Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 CICP23-201ENST00000605013 2741 ntBASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHA4Q9UN74 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 AC063926.2-201ENST00000623766 1308 ntBASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 FTH1P14-201ENST00000482930 551 ntBASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 AC132938.4-201ENST00000623835 848 ntBASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHA4Q9UN74 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 POM121L8P-201ENST00000417732 1281 ntBASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 AC245100.3-201ENST00000441281 285 ntBASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 POM121L9P-203ENST00000441984 1285 ntBASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 FO681548.1-201ENST00000455617 1132 ntBASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 AC106886.1-201ENST00000568660 600 ntBASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 ENPP7P14-201ENST00000621765 1040 ntBASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 AC018442.1-201ENST00000421439 2061 ntBASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms