Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 IGF1-203ENST00000392904 761 ntTSL 5 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 PUDPP3-201ENST00000445368 636 ntBASIC17.42■□□□□ 0.38
PNMA3Q9UL41 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 AC009955.4-201ENST00000597192 544 ntBASIC17.42■□□□□ 0.38
PNMA3Q9UL41 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 REXO1L5P-201ENST00000622260 2098 ntBASIC17.42■□□□□ 0.38
PNMA3Q9UL41 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PNMA3Q9UL41 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 SHC1P1-201ENST00000425230 1745 ntBASIC17.41■□□□□ 0.38
PNMA3Q9UL41 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 AL353770.1-201ENST00000614915 403 ntBASIC17.41■□□□□ 0.38
PNMA3Q9UL41 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.41■□□□□ 0.38
PNMA3Q9UL41 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.41■□□□□ 0.38
PNMA3Q9UL41 PAUPAR-201ENST00000630360 2965 ntBASIC17.4■□□□□ 0.38
PNMA3Q9UL41 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 AC090857.1-201ENST00000527400 390 ntBASIC17.4■□□□□ 0.38
PNMA3Q9UL41 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 DUX4L46-201ENST00000566845 751 ntBASIC17.4■□□□□ 0.38
PNMA3Q9UL41 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 NAP1L6-202ENST00000641404 1222 ntBASIC17.4■□□□□ 0.38
PNMA3Q9UL41 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.4■□□□□ 0.38
PNMA3Q9UL41 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms