Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 TPM3P8-201ENST00000330554 643 ntBASIC15.51■□□□□ 0.07
EBF1Q9UH73 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 KLF2P2-201ENST00000416807 1039 ntBASIC15.51■□□□□ 0.07
EBF1Q9UH73 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 AC005077.2-201ENST00000449786 690 ntBASIC15.51■□□□□ 0.07
EBF1Q9UH73 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 AL096828.3-201ENST00000615354 462 ntBASIC15.51■□□□□ 0.07
EBF1Q9UH73 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 AC015967.2-201ENST00000624092 234 ntBASIC15.51■□□□□ 0.07
EBF1Q9UH73 AC006435.4-201ENST00000625037 234 ntBASIC15.51■□□□□ 0.07
EBF1Q9UH73 AL356737.1-201ENST00000634391 234 ntBASIC15.51■□□□□ 0.07
EBF1Q9UH73 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
EBF1Q9UH73 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.51■□□□□ 0.07
EBF1Q9UH73 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 AC026748.1-201ENST00000624349 3251 ntBASIC15.5■□□□□ 0.07
EBF1Q9UH73 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 CNN2P10-201ENST00000443067 918 ntBASIC15.5■□□□□ 0.07
EBF1Q9UH73 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 PRSS30P-206ENST00000641773 873 ntBASIC15.5■□□□□ 0.07
EBF1Q9UH73 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
EBF1Q9UH73 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
EBF1Q9UH73 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
EBF1Q9UH73 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
EBF1Q9UH73 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms