Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 CCNL2P1-201ENST00000512846 969 ntBASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 CDC37P2-201ENST00000562287 1029 ntBASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 NAT9-204ENST00000578822 839 ntTSL 3 BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC23.08■■□□□ 1.29
RIMBP3Q9UFD9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 AIG1-203ENST00000367596 559 ntTSL 2 BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 WDR54-202ENST00000409791 854 ntTSL 3 BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 AC079325.1-201ENST00000430386 857 ntBASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 AC133141.1-201ENST00000443015 339 ntBASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 AC009041.4-201ENST00000620075 638 ntBASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 AC048382.6-201ENST00000621980 1223 ntBASIC23.08■■□□□ 1.28
RIMBP3Q9UFD9 TNRC18P3-201ENST00000441896 2691 ntBASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 EEF1GP8-201ENST00000506566 1154 ntBASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC23.07■■□□□ 1.28
RIMBP3Q9UFD9 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 AC139713.2-201ENST00000641328 2723 ntBASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 RPL18AP16-201ENST00000424057 531 ntBASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 RNU1-80P-201ENST00000459500 161 ntBASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 GOLGA2P8-201ENST00000505201 779 ntBASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 NDUFB10P1-201ENST00000567319 521 ntBASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 AC126755.5-201ENST00000622756 267 ntBASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RIMBP3Q9UFD9 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms