Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCDNQ9UBB6 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.04■□□□□ -0
NCDNQ9UBB6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCDNQ9UBB6 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.04■□□□□ -0
NCDNQ9UBB6 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.04■□□□□ -0
NCDNQ9UBB6 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCDNQ9UBB6 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.04■□□□□ -0
NCDNQ9UBB6 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
NCDNQ9UBB6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
NCDNQ9UBB6 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.04■□□□□ -0
NCDNQ9UBB6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.04■□□□□ -0
NCDNQ9UBB6 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.04■□□□□ -0
NCDNQ9UBB6 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.04■□□□□ -0
NCDNQ9UBB6 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC15.04■□□□□ -0
NCDNQ9UBB6 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NCDNQ9UBB6 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.04■□□□□ -0
NCDNQ9UBB6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.04■□□□□ -0
NCDNQ9UBB6 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NCDNQ9UBB6 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NCDNQ9UBB6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.04■□□□□ -0
NCDNQ9UBB6 MIR4754-201ENST00000582477 89 ntBASIC15.04■□□□□ -0
NCDNQ9UBB6 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.04■□□□□ -0
NCDNQ9UBB6 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
NCDNQ9UBB6 AP001527.2-201ENST00000614441 631 ntBASIC15.04■□□□□ -0
NCDNQ9UBB6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.04■□□□□ -0
NCDNQ9UBB6 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.04■□□□□ -0
NCDNQ9UBB6 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.04■□□□□ -0
NCDNQ9UBB6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NCDNQ9UBB6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.04■□□□□ -0
NCDNQ9UBB6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NCDNQ9UBB6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.04■□□□□ -0
NCDNQ9UBB6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCDNQ9UBB6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
NCDNQ9UBB6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NCDNQ9UBB6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCDNQ9UBB6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NCDNQ9UBB6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.04■□□□□ -0
NCDNQ9UBB6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.04■□□□□ -0
NCDNQ9UBB6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NCDNQ9UBB6 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.04■□□□□ -0
NCDNQ9UBB6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
NCDNQ9UBB6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NCDNQ9UBB6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NCDNQ9UBB6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.03■□□□□ -0
NCDNQ9UBB6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.03■□□□□ -0
NCDNQ9UBB6 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.03■□□□□ -0
NCDNQ9UBB6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
NCDNQ9UBB6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NCDNQ9UBB6 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NCDNQ9UBB6 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
NCDNQ9UBB6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.03■□□□□ -0
NCDNQ9UBB6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.03■□□□□ -0
NCDNQ9UBB6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 AC073150.1-201ENST00000450406 1084 ntBASIC15.03■□□□□ -0
NCDNQ9UBB6 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.03■□□□□ -0
NCDNQ9UBB6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.03■□□□□ -0
NCDNQ9UBB6 POU5F1P2-201ENST00000521750 823 ntBASIC15.03■□□□□ -0
NCDNQ9UBB6 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.03■□□□□ -0
NCDNQ9UBB6 AC106820.3-201ENST00000561653 397 ntBASIC15.03■□□□□ -0
NCDNQ9UBB6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.03■□□□□ -0
NCDNQ9UBB6 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.03■□□□□ -0
NCDNQ9UBB6 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.03■□□□□ -0
NCDNQ9UBB6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.03■□□□□ -0
NCDNQ9UBB6 PRSS30P-206ENST00000641773 873 ntBASIC15.03■□□□□ -0
NCDNQ9UBB6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.03■□□□□ -0
NCDNQ9UBB6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.03■□□□□ -0
NCDNQ9UBB6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.03■□□□□ -0
NCDNQ9UBB6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NCDNQ9UBB6 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NCDNQ9UBB6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NCDNQ9UBB6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.02■□□□□ -0
NCDNQ9UBB6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.02■□□□□ -0
NCDNQ9UBB6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.02■□□□□ -0
NCDNQ9UBB6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NCDNQ9UBB6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
NCDNQ9UBB6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NCDNQ9UBB6 AC068587.6-202ENST00000641839 5619 ntBASIC15.02■□□□□ -0
NCDNQ9UBB6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NCDNQ9UBB6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.02■□□□□ -0
NCDNQ9UBB6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.02■□□□□ -0
NCDNQ9UBB6 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NCDNQ9UBB6 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.02■□□□□ -0
NCDNQ9UBB6 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 350.7 ms