Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.09■□□□□ 0.17
CD248Q9HCU0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 CLK3P2-201ENST00000427566 1453 ntBASIC16.09■□□□□ 0.17
CD248Q9HCU0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 REXO1L2P-201ENST00000425429 2069 ntBASIC16.09■□□□□ 0.17
CD248Q9HCU0 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.09■□□□□ 0.17
CD248Q9HCU0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 BNIP3P1-202ENST00000550043 1585 ntBASIC16.09■□□□□ 0.17
CD248Q9HCU0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CD248Q9HCU0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CD248Q9HCU0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CD248Q9HCU0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD248Q9HCU0 DGCR9-201ENST00000609630 2415 ntBASIC16.08■□□□□ 0.17
CD248Q9HCU0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD248Q9HCU0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CD248Q9HCU0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD248Q9HCU0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
CD248Q9HCU0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.17
CD248Q9HCU0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CD248Q9HCU0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 TARDBPP1-201ENST00000442013 1203 ntBASIC16.08■□□□□ 0.16
CD248Q9HCU0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 USP32P1-208ENST00000506594 1164 ntBASIC16.08■□□□□ 0.16
CD248Q9HCU0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 SNX29P1-201ENST00000548357 1007 ntBASIC16.08■□□□□ 0.16
CD248Q9HCU0 AC243562.2-201ENST00000561247 970 ntBASIC16.08■□□□□ 0.16
CD248Q9HCU0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CD248Q9HCU0 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.08■□□□□ 0.16
CD248Q9HCU0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CD248Q9HCU0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CD248Q9HCU0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms