Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 AC006529.1-201ENST00000459978 637 ntBASIC13.75□□□□□ -0.21
CHD8Q9HCK8 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 AL118522.1-201ENST00000611368 560 ntBASIC13.75□□□□□ -0.21
CHD8Q9HCK8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 AC091304.3-201ENST00000566500 716 ntBASIC13.75□□□□□ -0.21
CHD8Q9HCK8 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHD8Q9HCK8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 AC084364.1-201ENST00000551967 1556 ntBASIC13.74□□□□□ -0.21
CHD8Q9HCK8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 AL662844.4-201ENST00000606367 2838 ntBASIC13.74□□□□□ -0.21
CHD8Q9HCK8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 RNVU1-8-201ENST00000364272 125 ntBASIC13.74□□□□□ -0.21
CHD8Q9HCK8 RN7SL147P-201ENST00000487345 298 ntBASIC13.74□□□□□ -0.21
CHD8Q9HCK8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 MIR6720-201ENST00000611664 98 ntBASIC13.74□□□□□ -0.21
CHD8Q9HCK8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 AL050341.2-201ENST00000567508 1541 ntBASIC13.74□□□□□ -0.21
CHD8Q9HCK8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 OR2R1P-201ENST00000441404 914 ntBASIC13.74□□□□□ -0.21
CHD8Q9HCK8 AC079414.2-201ENST00000567157 1104 ntBASIC13.74□□□□□ -0.21
CHD8Q9HCK8 RN7SL440P-201ENST00000577855 343 ntBASIC13.74□□□□□ -0.21
CHD8Q9HCK8 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CHD8Q9HCK8 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 RPL4P6-201ENST00000438116 1304 ntBASIC13.73□□□□□ -0.21
CHD8Q9HCK8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 FAM86FP-201ENST00000338711 969 ntBASIC13.73□□□□□ -0.21
CHD8Q9HCK8 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 RNASEH2CP1-201ENST00000454281 502 ntBASIC13.73□□□□□ -0.21
CHD8Q9HCK8 PEBP1P3-201ENST00000455475 548 ntBASIC13.73□□□□□ -0.21
CHD8Q9HCK8 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 DERL2-206ENST00000572834 589 ntTSL 3 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.73□□□□□ -0.21
CHD8Q9HCK8 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms