Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.38□□□□□ -0.27
SLIRPQ9GZT3 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SLIRPQ9GZT3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLIRPQ9GZT3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SLIRPQ9GZT3 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.38□□□□□ -0.27
SLIRPQ9GZT3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SLIRPQ9GZT3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 MIR497HG-202ENST00000572453 3838 ntBASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 AZGP1P1-201ENST00000411909 902 ntBASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 AC108073.2-201ENST00000464002 357 ntBASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 AL732292.2-201ENST00000609649 430 ntBASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SLIRPQ9GZT3 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 KHSRPP1-201ENST00000427983 1768 ntBASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 AL139010.1-201ENST00000454878 894 ntBASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
SLIRPQ9GZT3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 260.1 ms