Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 AC010336.2-201ENST00000564226 506 ntBASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 AC051619.7-201ENST00000568314 623 ntBASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 AC015911.4-201ENST00000588022 1070 ntBASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 AC007787.1-201ENST00000588095 1583 ntBASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.13□□□□□ -0.15
POLR2J2Q9GZM3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 AL512361.1-201ENST00000554200 418 ntBASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 SPDYE12P-201ENST00000618416 771 ntBASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 AC073592.8-201ENST00000624126 511 ntBASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 AF228730.6-201ENST00000641497 218 ntBASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 AC084121.3-201ENST00000641716 218 ntBASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
POLR2J2Q9GZM3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.11□□□□□ -0.15
POLR2J2Q9GZM3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms