Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RAB40CQ96S21 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.4□□□□□ -0.42
RAB40CQ96S21 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.4□□□□□ -0.42
RAB40CQ96S21 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.4□□□□□ -0.43
RAB40CQ96S21 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.4□□□□□ -0.43
RAB40CQ96S21 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
RAB40CQ96S21 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
RAB40CQ96S21 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.4□□□□□ -0.43
RAB40CQ96S21 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
RAB40CQ96S21 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 MIR940-201ENST00000401276 94 ntBASIC12.39□□□□□ -0.43
RAB40CQ96S21 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 RN7SL589P-201ENST00000481268 310 ntBASIC12.39□□□□□ -0.43
RAB40CQ96S21 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 PDPK2P-202ENST00000562415 1191 ntBASIC12.39□□□□□ -0.43
RAB40CQ96S21 AL135744.1-201ENST00000565098 629 ntBASIC12.39□□□□□ -0.43
RAB40CQ96S21 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 AC015910.1-201ENST00000579400 975 ntBASIC12.39□□□□□ -0.43
RAB40CQ96S21 AC140113.2-201ENST00000604370 208 ntBASIC12.39□□□□□ -0.43
RAB40CQ96S21 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.39□□□□□ -0.43
RAB40CQ96S21 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
RAB40CQ96S21 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RAB40CQ96S21 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RAB40CQ96S21 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms