Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 EEF1DP4-201ENST00000446006 880 ntBASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.39■□□□□ 0.05
CHMP6Q96FZ7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 AL607033.1-201ENST00000623900 1599 ntBASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 AC098859.1-201ENST00000502915 1238 ntBASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 AC034105.1-201ENST00000563488 319 ntBASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 AC015818.8-201ENST00000587907 1519 ntBASIC15.38■□□□□ 0.05
CHMP6Q96FZ7 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CHMP6Q96FZ7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms