Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 TMEM261P1-201ENST00000604899 340 ntBASIC15.76■□□□□ 0.11
IFT43Q96FT9 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 AL008721.1-201ENST00000609964 604 ntBASIC15.76■□□□□ 0.11
IFT43Q96FT9 IGHV3-72-202ENST00000621503 303 ntBASIC15.76■□□□□ 0.11
IFT43Q96FT9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 AC005912.2-201ENST00000619492 2400 ntBASIC15.76■□□□□ 0.11
IFT43Q96FT9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.76■□□□□ 0.11
IFT43Q96FT9 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IFT43Q96FT9 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 AL589987.1-201ENST00000453380 819 ntBASIC15.75■□□□□ 0.11
IFT43Q96FT9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 AC005252.3-201ENST00000623855 2258 ntBASIC15.75■□□□□ 0.11
IFT43Q96FT9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
IFT43Q96FT9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
IFT43Q96FT9 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 AL109954.1-202ENST00000564051 2148 ntBASIC15.74■□□□□ 0.11
IFT43Q96FT9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 WASH4P-201ENST00000564273 1246 ntBASIC15.74■□□□□ 0.11
IFT43Q96FT9 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
IFT43Q96FT9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.74■□□□□ 0.11
IFT43Q96FT9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms