Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APH1AQ96BI3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
APH1AQ96BI3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 MROH4P-201ENST00000431302 1578 ntBASIC13.5□□□□□ -0.25
APH1AQ96BI3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 AL360270.3-201ENST00000609118 1348 ntBASIC13.5□□□□□ -0.25
APH1AQ96BI3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 BOLA2P3-201ENST00000404566 256 ntBASIC13.5□□□□□ -0.25
APH1AQ96BI3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.5□□□□□ -0.25
APH1AQ96BI3 C2orf27AP3-201ENST00000434123 579 ntBASIC13.5□□□□□ -0.25
APH1AQ96BI3 U91328.1-201ENST00000437528 223 ntBASIC13.5□□□□□ -0.25
APH1AQ96BI3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 AL354718.3-201ENST00000616414 581 ntBASIC13.5□□□□□ -0.25
APH1AQ96BI3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 CR382287.1-201ENST00000623954 586 ntBASIC13.5□□□□□ -0.25
APH1AQ96BI3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APH1AQ96BI3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
APH1AQ96BI3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.49□□□□□ -0.25
APH1AQ96BI3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
APH1AQ96BI3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
APH1AQ96BI3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.49□□□□□ -0.25
APH1AQ96BI3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
APH1AQ96BI3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
APH1AQ96BI3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.49□□□□□ -0.25
APH1AQ96BI3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.49□□□□□ -0.25
APH1AQ96BI3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.49□□□□□ -0.25
APH1AQ96BI3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APH1AQ96BI3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.49□□□□□ -0.25
APH1AQ96BI3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.49□□□□□ -0.25
APH1AQ96BI3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.49□□□□□ -0.25
APH1AQ96BI3 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.49□□□□□ -0.25
APH1AQ96BI3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms