Protein–RNA interactions for Protein: Q92925

SMARCD2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2Q92925 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SMARCD2Q92925 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SMARCD2Q92925 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SMARCD2Q92925 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SMARCD2Q92925 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SMARCD2Q92925 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 AF254983.2-201ENST00000612331 135 ntBASIC15.47■□□□□ 0.07
SMARCD2Q92925 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 AP000346.4-201ENST00000614827 381 ntBASIC15.47■□□□□ 0.07
SMARCD2Q92925 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 AC092850.2-201ENST00000623821 2697 ntBASIC15.47■□□□□ 0.07
SMARCD2Q92925 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.47■□□□□ 0.07
SMARCD2Q92925 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMARCD2Q92925 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 MIR33B-201ENST00000385104 96 ntBASIC15.46■□□□□ 0.07
SMARCD2Q92925 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.46■□□□□ 0.07
SMARCD2Q92925 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 AL353637.1-201ENST00000451571 732 ntBASIC15.46■□□□□ 0.07
SMARCD2Q92925 HLA-J-204ENST00000495278 958 ntBASIC15.46■□□□□ 0.07
SMARCD2Q92925 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 PRKXP1-201ENST00000561423 1122 ntBASIC15.46■□□□□ 0.07
SMARCD2Q92925 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 AC008805.1-201ENST00000590892 364 ntBASIC15.46■□□□□ 0.07
SMARCD2Q92925 SPCS2P2-201ENST00000603270 608 ntBASIC15.46■□□□□ 0.07
SMARCD2Q92925 AL353770.1-201ENST00000614915 403 ntBASIC15.46■□□□□ 0.07
SMARCD2Q92925 NAP1L6-202ENST00000641404 1222 ntBASIC15.46■□□□□ 0.07
SMARCD2Q92925 AC006058.4-201ENST00000624016 1670 ntBASIC15.46■□□□□ 0.07
SMARCD2Q92925 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.46■□□□□ 0.07
SMARCD2Q92925 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMARCD2Q92925 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SMARCD2Q92925 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms