Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB3IL1Q8TBN0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 REXO1L4P-201ENST00000605109 1937 ntBASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 STRCP1-201ENST00000509801 5328 ntBASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 AC145285.3-201ENST00000564603 959 ntBASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 AC015910.1-201ENST00000579400 975 ntBASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 INTS4P1-203ENST00000641008 3683 ntBASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB3IL1Q8TBN0 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 AP001267.2-201ENST00000532619 2086 ntBASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 AL928921.2-201ENST00000641325 2442 ntBASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 TPT1P11-201ENST00000458482 498 ntBASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB3IL1Q8TBN0 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms