Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 AC104982.3-201ENST00000581995 514 ntBASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 AL096828.3-201ENST00000615354 462 ntBASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 AC138035.3-201ENST00000622706 2791 ntBASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHKBP1Q8TBC3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 SSR4P1-203ENST00000599569 2260 ntBASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 CICP13-201ENST00000422015 2789 ntBASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 AC084346.2-201ENST00000607097 949 ntBASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 AL645728.2-202ENST00000641679 227 ntBASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHKBP1Q8TBC3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 AC023157.3-201ENST00000619086 2088 ntBASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SHKBP1Q8TBC3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms