Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 INE2-201ENST00000630399 1874 ntBASIC11.42□□□□□ -0.58
NUP35Q8NFH5 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.41□□□□□ -0.58
NUP35Q8NFH5 RPS2P1-201ENST00000434010 821 ntBASIC11.41□□□□□ -0.58
NUP35Q8NFH5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 AC092119.3-201ENST00000612618 583 ntBASIC11.41□□□□□ -0.58
NUP35Q8NFH5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
NUP35Q8NFH5 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 AC073548.1-201ENST00000624088 1882 ntBASIC11.4□□□□□ -0.58
NUP35Q8NFH5 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 AC083964.2-201ENST00000623988 2396 ntBASIC11.4□□□□□ -0.58
NUP35Q8NFH5 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 PRSS29P-201ENST00000440800 595 ntBASIC11.4□□□□□ -0.58
NUP35Q8NFH5 FAM210CP-201ENST00000445714 574 ntBASIC11.4□□□□□ -0.58
NUP35Q8NFH5 AL139010.1-201ENST00000454878 894 ntBASIC11.4□□□□□ -0.58
NUP35Q8NFH5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.4□□□□□ -0.58
NUP35Q8NFH5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms