Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 AL512356.2-201ENST00000546955 174 ntBASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC170Q8IYT3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 AC023141.5-201ENST00000458585 616 ntBASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 HLA-V-204ENST00000476601 1289 ntBASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 AL354702.1-201ENST00000442006 1960 ntBASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC170Q8IYT3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
CCDC170Q8IYT3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms