Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 RCN1P2-201ENST00000398357 915 ntBASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 AP002383.4-201ENST00000442518 975 ntBASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 AP000867.4-201ENST00000641616 219 ntBASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 CES1P1-201ENST00000421606 1704 ntBASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.86□□□□□ -0.51
KCNIP4Q6PIL6 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 IGHV3-47-201ENST00000425060 335 ntBASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 ABCD1P5-201ENST00000445663 754 ntBASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
KCNIP4Q6PIL6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms