Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASC4Q6P4E1 AC126335.2-201ENST00000623362 4637 ntBASIC15.6■□□□□ 0.09
CASC4Q6P4E1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.59■□□□□ 0.09
CASC4Q6P4E1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 AC067863.1-201ENST00000494933 530 ntBASIC15.59■□□□□ 0.09
CASC4Q6P4E1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 AC093028.1-201ENST00000622998 982 ntBASIC15.59■□□□□ 0.09
CASC4Q6P4E1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.59■□□□□ 0.09
CASC4Q6P4E1 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
CASC4Q6P4E1 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
CASC4Q6P4E1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CASC4Q6P4E1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CASC4Q6P4E1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.58■□□□□ 0.09
CASC4Q6P4E1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.58■□□□□ 0.09
CASC4Q6P4E1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CASC4Q6P4E1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CASC4Q6P4E1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 TREML5P-201ENST00000421694 576 ntBASIC15.58■□□□□ 0.08
CASC4Q6P4E1 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 IGHV3-42-201ENST00000520410 361 ntBASIC15.58■□□□□ 0.08
CASC4Q6P4E1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.58■□□□□ 0.08
CASC4Q6P4E1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms