Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ATPAF1Q5TC12 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 AC010327.5-201ENST00000586923 3061 ntBASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 AC027796.2-201ENST00000575326 344 ntBASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 AC027601.5-201ENST00000624065 2482 ntBASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
ATPAF1Q5TC12 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 INTS4P1-203ENST00000641008 3683 ntBASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 AC079781.5-202ENST00000641784 3743 ntBASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ATPAF1Q5TC12 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ATPAF1Q5TC12 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.27□□□□□ -0.29
ATPAF1Q5TC12 TSSK5P-201ENST00000423978 907 ntBASIC13.27□□□□□ -0.29
ATPAF1Q5TC12 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.27□□□□□ -0.29
ATPAF1Q5TC12 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.27□□□□□ -0.29
ATPAF1Q5TC12 RN7SL618P-201ENST00000477850 296 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms