Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 FAM220BP-201ENST00000377689 816 ntBASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 MEP1AP4-201ENST00000423244 1087 ntBASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 ZNF890P-202ENST00000530367 1156 ntBASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 AC055876.2-201ENST00000531834 546 ntBASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 WASH4P-201ENST00000564273 1246 ntBASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 AC105021.1-202ENST00000570572 669 ntBASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 CHCHD2P3-201ENST00000603038 451 ntBASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 SPTSSB-204ENST00000617024 1292 ntBASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 AL133338.1-201ENST00000565695 1517 ntBASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.43□□□□□ -0.26
CHRFAM7AQ494W8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 KRT223P-202ENST00000449164 1292 ntBASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 RNA5SP410-201ENST00000516285 106 ntBASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 AL079307.3-201ENST00000556114 283 ntBASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 SNX18-202ENST00000343017 3140 ntBASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 AC126365.1-201ENST00000578585 1514 ntBASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 AC013726.1-201ENST00000563747 2285 ntBASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CHRFAM7AQ494W8 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms