Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CCDC27Q2M243 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC27Q2M243 AC006453.4-201ENST00000636949 1252 ntBASIC19.68■□□□□ 0.74
CCDC27Q2M243 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC27Q2M243 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC27Q2M243 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC27Q2M243 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC27Q2M243 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC27Q2M243 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC27Q2M243 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC27Q2M243 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC27Q2M243 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CCDC27Q2M243 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.67■□□□□ 0.74
CCDC27Q2M243 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC27Q2M243 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC27Q2M243 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CCDC27Q2M243 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC27Q2M243 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC27Q2M243 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC27Q2M243 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC27Q2M243 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 BOLA2P3-201ENST00000404566 256 ntBASIC19.66■□□□□ 0.74
CCDC27Q2M243 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 AC112492.5-201ENST00000421897 457 ntBASIC19.66■□□□□ 0.74
CCDC27Q2M243 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 CROCCP4-201ENST00000457096 498 ntBASIC19.66■□□□□ 0.74
CCDC27Q2M243 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 KRT17P8-201ENST00000540749 863 ntBASIC19.66■□□□□ 0.74
CCDC27Q2M243 AC078819.1-201ENST00000547454 765 ntBASIC19.66■□□□□ 0.74
CCDC27Q2M243 AC012085.1-201ENST00000548270 765 ntBASIC19.66■□□□□ 0.74
CCDC27Q2M243 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 ECM1P1-201ENST00000604092 1279 ntBASIC19.66■□□□□ 0.74
CCDC27Q2M243 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CCDC27Q2M243 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC27Q2M243 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC27Q2M243 TPM3P8-201ENST00000330554 643 ntBASIC19.65■□□□□ 0.74
CCDC27Q2M243 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 RPL7P3-201ENST00000441388 714 ntBASIC19.65■□□□□ 0.74
CCDC27Q2M243 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 AL590640.2-201ENST00000457038 527 ntBASIC19.65■□□□□ 0.74
CCDC27Q2M243 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 ALG3P1-201ENST00000508806 1114 ntBASIC19.65■□□□□ 0.74
CCDC27Q2M243 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC27Q2M243 AL512343.1-201ENST00000605837 169 ntBASIC19.65■□□□□ 0.74
CCDC27Q2M243 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms