Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.68■□□□□ 0.42
GABPAQ06546 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
GABPAQ06546 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GABPAQ06546 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GABPAQ06546 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
GABPAQ06546 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.67■□□□□ 0.42
GABPAQ06546 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABPAQ06546 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABPAQ06546 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABPAQ06546 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
GABPAQ06546 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.67■□□□□ 0.42
GABPAQ06546 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABPAQ06546 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABPAQ06546 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.67■□□□□ 0.42
GABPAQ06546 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.67■□□□□ 0.42
GABPAQ06546 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
GABPAQ06546 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GABPAQ06546 TLE1P1-201ENST00000422965 589 ntBASIC17.67■□□□□ 0.42
GABPAQ06546 HIST2H2BC-201ENST00000498492 580 ntBASIC17.67■□□□□ 0.42
GABPAQ06546 AC044849.1-201ENST00000519737 1188 ntBASIC17.67■□□□□ 0.42
GABPAQ06546 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.67■□□□□ 0.42
GABPAQ06546 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.67■□□□□ 0.42
GABPAQ06546 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.67■□□□□ 0.42
GABPAQ06546 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.67■□□□□ 0.42
GABPAQ06546 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.67■□□□□ 0.42
GABPAQ06546 AL136301.1-201ENST00000615830 422 ntBASIC17.67■□□□□ 0.42
GABPAQ06546 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.67■□□□□ 0.42
GABPAQ06546 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABPAQ06546 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
GABPAQ06546 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GABPAQ06546 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GABPAQ06546 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.67■□□□□ 0.42
GABPAQ06546 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
GABPAQ06546 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
GABPAQ06546 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.67■□□□□ 0.42
GABPAQ06546 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.67■□□□□ 0.42
GABPAQ06546 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GABPAQ06546 SHC1P1-201ENST00000425230 1745 ntBASIC17.67■□□□□ 0.42
GABPAQ06546 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
GABPAQ06546 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.66■□□□□ 0.42
GABPAQ06546 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.66■□□□□ 0.42
GABPAQ06546 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.66■□□□□ 0.42
GABPAQ06546 AC016700.1-201ENST00000429424 312 ntBASIC17.66■□□□□ 0.42
GABPAQ06546 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.66■□□□□ 0.42
GABPAQ06546 ALG3P1-201ENST00000508806 1114 ntBASIC17.66■□□□□ 0.42
GABPAQ06546 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
GABPAQ06546 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
GABPAQ06546 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.66■□□□□ 0.42
GABPAQ06546 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.66■□□□□ 0.42
GABPAQ06546 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 AC105917.1-201ENST00000506637 2539 ntBASIC17.66■□□□□ 0.42
GABPAQ06546 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GABPAQ06546 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.66■□□□□ 0.42
GABPAQ06546 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.66■□□□□ 0.42
GABPAQ06546 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.66■□□□□ 0.42
GABPAQ06546 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GABPAQ06546 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.65■□□□□ 0.42
GABPAQ06546 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABPAQ06546 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
GABPAQ06546 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPAQ06546 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPAQ06546 AC138035.3-201ENST00000622706 2791 ntBASIC17.65■□□□□ 0.42
GABPAQ06546 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
GABPAQ06546 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.65■□□□□ 0.42
GABPAQ06546 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPAQ06546 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPAQ06546 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABPAQ06546 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABPAQ06546 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABPAQ06546 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPAQ06546 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABPAQ06546 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABPAQ06546 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GABPAQ06546 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GABPAQ06546 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
GABPAQ06546 FNTAP2-201ENST00000430308 634 ntBASIC17.65■□□□□ 0.42
GABPAQ06546 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.65■□□□□ 0.42
GABPAQ06546 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.65■□□□□ 0.42
GABPAQ06546 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.65■□□□□ 0.42
GABPAQ06546 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.65■□□□□ 0.42
GABPAQ06546 ACTG1P17-201ENST00000558391 1119 ntBASIC17.65■□□□□ 0.42
GABPAQ06546 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.65■□□□□ 0.42
GABPAQ06546 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.65■□□□□ 0.42
GABPAQ06546 AC005324.6-201ENST00000587972 613 ntBASIC17.65■□□□□ 0.42
GABPAQ06546 AC020914.3-201ENST00000594712 304 ntBASIC17.65■□□□□ 0.42
GABPAQ06546 BNIP3P13-201ENST00000599968 566 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms