Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.71□□□□□ -0.06
HMGCS1Q01581 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCS1Q01581 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCS1Q01581 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.71□□□□□ -0.06
HMGCS1Q01581 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCS1Q01581 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCS1Q01581 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCS1Q01581 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCS1Q01581 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
HMGCS1Q01581 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCS1Q01581 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 AC004890.2-204ENST00000481968 304 ntBASIC14.7□□□□□ -0.06
HMGCS1Q01581 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 AL390955.2-201ENST00000603032 514 ntBASIC14.7□□□□□ -0.06
HMGCS1Q01581 AC004790.1-201ENST00000612686 536 ntBASIC14.7□□□□□ -0.06
HMGCS1Q01581 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HMGCS1Q01581 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCS1Q01581 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 AL360270.3-201ENST00000609118 1348 ntBASIC14.69□□□□□ -0.06
HMGCS1Q01581 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 AC022144.1-201ENST00000602255 1580 ntBASIC14.69□□□□□ -0.06
HMGCS1Q01581 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HMGCS1Q01581 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 AC004066.1-201ENST00000502488 802 ntBASIC14.69□□□□□ -0.06
HMGCS1Q01581 GAPDHP40-201ENST00000505218 1006 ntBASIC14.69□□□□□ -0.06
HMGCS1Q01581 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.69□□□□□ -0.06
HMGCS1Q01581 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms