Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 DGAT2L7P-201ENST00000602462 744 ntBASIC16.27■□□□□ 0.2
SMAD3P84022 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMAD3P84022 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
SMAD3P84022 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.27■□□□□ 0.19
SMAD3P84022 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD3P84022 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD3P84022 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD3P84022 AP000593.2-201ENST00000542775 1433 ntBASIC16.27■□□□□ 0.19
SMAD3P84022 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD3P84022 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD3P84022 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SMAD3P84022 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SMAD3P84022 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
SMAD3P84022 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD3P84022 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.26■□□□□ 0.19
SMAD3P84022 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD3P84022 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.26■□□□□ 0.19
SMAD3P84022 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.26■□□□□ 0.19
SMAD3P84022 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMAD3P84022 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD3P84022 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SMAD3P84022 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SMAD3P84022 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD3P84022 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD3P84022 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD3P84022 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.26■□□□□ 0.19
SMAD3P84022 VDAC1P1-201ENST00000439229 848 ntBASIC16.26■□□□□ 0.19
SMAD3P84022 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.26■□□□□ 0.19
SMAD3P84022 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.26■□□□□ 0.19
SMAD3P84022 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.26■□□□□ 0.19
SMAD3P84022 AP003398.1-201ENST00000531124 318 ntBASIC16.26■□□□□ 0.19
SMAD3P84022 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.26■□□□□ 0.19
SMAD3P84022 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.26■□□□□ 0.19
SMAD3P84022 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.26■□□□□ 0.19
SMAD3P84022 MIR4683-201ENST00000579659 81 ntBASIC16.26■□□□□ 0.19
SMAD3P84022 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SMAD3P84022 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMAD3P84022 ETV2-207ENST00000619399 994 ntTSL 5 BASIC16.26■□□□□ 0.19
SMAD3P84022 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD3P84022 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SMAD3P84022 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD3P84022 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD3P84022 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMAD3P84022 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD3P84022 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD3P84022 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD3P84022 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD3P84022 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD3P84022 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD3P84022 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD3P84022 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD3P84022 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD3P84022 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SMAD3P84022 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD3P84022 AC112504.1-201ENST00000623415 1841 ntBASIC16.25■□□□□ 0.19
SMAD3P84022 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD3P84022 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD3P84022 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD3P84022 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.25■□□□□ 0.19
SMAD3P84022 AC026320.2-201ENST00000434379 478 ntBASIC16.25■□□□□ 0.19
SMAD3P84022 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD3P84022 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD3P84022 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.25■□□□□ 0.19
SMAD3P84022 RPL18AP3-201ENST00000462885 528 ntBASIC16.25■□□□□ 0.19
SMAD3P84022 AC012158.2-201ENST00000536546 354 ntBASIC16.25■□□□□ 0.19
SMAD3P84022 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.25■□□□□ 0.19
SMAD3P84022 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.25■□□□□ 0.19
SMAD3P84022 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD3P84022 MIR3677-201ENST00000578964 60 ntBASIC16.25■□□□□ 0.19
SMAD3P84022 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.25■□□□□ 0.19
SMAD3P84022 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SMAD3P84022 AC092299.1-201ENST00000632679 757 ntBASIC16.25■□□□□ 0.19
SMAD3P84022 LINC02199-201ENST00000506655 2702 ntBASIC16.25■□□□□ 0.19
SMAD3P84022 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD3P84022 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD3P84022 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD3P84022 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD3P84022 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD3P84022 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SMAD3P84022 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SMAD3P84022 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD3P84022 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD3P84022 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.25■□□□□ 0.19
SMAD3P84022 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD3P84022 AC024909.3-201ENST00000611513 2257 ntBASIC16.25■□□□□ 0.19
SMAD3P84022 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SMAD3P84022 SHC1P1-201ENST00000425230 1745 ntBASIC16.25■□□□□ 0.19
SMAD3P84022 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SMAD3P84022 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD3P84022 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
SMAD3P84022 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
SMAD3P84022 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD3P84022 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.24■□□□□ 0.19
SMAD3P84022 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SMAD3P84022 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD3P84022 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.24■□□□□ 0.19
SMAD3P84022 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SMAD3P84022 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD3P84022 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD3P84022 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms