Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.41■□□□□ 0.06
PRAMEP78395 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.41■□□□□ 0.06
PRAMEP78395 MEP1AP4-201ENST00000423244 1087 ntBASIC15.41■□□□□ 0.06
PRAMEP78395 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.41■□□□□ 0.06
PRAMEP78395 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 SAMD11P1-201ENST00000571429 661 ntBASIC15.41■□□□□ 0.06
PRAMEP78395 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PRAMEP78395 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.41■□□□□ 0.06
PRAMEP78395 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEP78395 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEP78395 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PRAMEP78395 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.41■□□□□ 0.06
PRAMEP78395 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PRAMEP78395 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 LINC01101-201ENST00000622953 1884 ntBASIC15.41■□□□□ 0.06
PRAMEP78395 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PRAMEP78395 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.41■□□□□ 0.06
PRAMEP78395 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PRAMEP78395 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PRAMEP78395 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PRAMEP78395 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 AC013726.1-201ENST00000563747 2285 ntBASIC15.4■□□□□ 0.06
PRAMEP78395 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 AC104457.1-201ENST00000401024 814 ntBASIC15.4■□□□□ 0.06
PRAMEP78395 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEP78395 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PRAMEP78395 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.4■□□□□ 0.06
PRAMEP78395 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEP78395 FAM86LP-201ENST00000478302 853 ntBASIC15.4■□□□□ 0.06
PRAMEP78395 AC004066.1-201ENST00000502488 802 ntBASIC15.4■□□□□ 0.06
PRAMEP78395 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.4■□□□□ 0.06
PRAMEP78395 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.4■□□□□ 0.06
PRAMEP78395 AC023310.3-201ENST00000557027 670 ntBASIC15.4■□□□□ 0.06
PRAMEP78395 AC100756.1-201ENST00000562736 682 ntBASIC15.4■□□□□ 0.06
PRAMEP78395 AC138749.3-201ENST00000567691 622 ntBASIC15.4■□□□□ 0.06
PRAMEP78395 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 AC116165.1-201ENST00000611806 668 ntBASIC15.4■□□□□ 0.06
PRAMEP78395 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.4■□□□□ 0.06
PRAMEP78395 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 AL359258.3-201ENST00000622910 2331 ntBASIC15.4■□□□□ 0.06
PRAMEP78395 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 REXO1L2P-201ENST00000425429 2069 ntBASIC15.4■□□□□ 0.06
PRAMEP78395 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEP78395 AJ011931.1-201ENST00000618749 2492 ntBASIC15.4■□□□□ 0.06
PRAMEP78395 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEP78395 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PRAMEP78395 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 ACE3P-201ENST00000423435 1973 ntBASIC15.4■□□□□ 0.06
PRAMEP78395 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PRAMEP78395 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.4■□□□□ 0.06
PRAMEP78395 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRAMEP78395 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEP78395 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEP78395 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEP78395 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.39■□□□□ 0.05
PRAMEP78395 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEP78395 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEP78395 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEP78395 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEP78395 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEP78395 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEP78395 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEP78395 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEP78395 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRAMEP78395 AC007686.3-201ENST00000619017 3487 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms