Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.08□□□□□ -0.32
ABCA4P78363 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ABCA4P78363 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ABCA4P78363 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.08□□□□□ -0.32
ABCA4P78363 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.08□□□□□ -0.32
ABCA4P78363 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
ABCA4P78363 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ABCA4P78363 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.08□□□□□ -0.32
ABCA4P78363 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ABCA4P78363 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.08□□□□□ -0.32
ABCA4P78363 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.08□□□□□ -0.32
ABCA4P78363 AC008267.1-201ENST00000474858 1069 ntBASIC13.08□□□□□ -0.32
ABCA4P78363 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ABCA4P78363 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.08□□□□□ -0.32
ABCA4P78363 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
ABCA4P78363 AL358472.3-201ENST00000608147 415 ntBASIC13.08□□□□□ -0.32
ABCA4P78363 AC079336.7-201ENST00000623428 1078 ntBASIC13.08□□□□□ -0.32
ABCA4P78363 AC068587.8-201ENST00000641239 219 ntBASIC13.08□□□□□ -0.32
ABCA4P78363 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ABCA4P78363 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.07□□□□□ -0.32
ABCA4P78363 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.07□□□□□ -0.32
ABCA4P78363 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
ABCA4P78363 REXO1L5P-201ENST00000622260 2098 ntBASIC13.07□□□□□ -0.32
ABCA4P78363 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.07□□□□□ -0.32
ABCA4P78363 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.07□□□□□ -0.32
ABCA4P78363 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.07□□□□□ -0.32
ABCA4P78363 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.07□□□□□ -0.32
ABCA4P78363 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ABCA4P78363 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.07□□□□□ -0.32
ABCA4P78363 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.07□□□□□ -0.32
ABCA4P78363 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.07□□□□□ -0.32
ABCA4P78363 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ABCA4P78363 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.07□□□□□ -0.32
ABCA4P78363 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.07□□□□□ -0.32
ABCA4P78363 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.07□□□□□ -0.32
ABCA4P78363 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
ABCA4P78363 IQSEC3P1-201ENST00000538799 536 ntBASIC13.07□□□□□ -0.32
ABCA4P78363 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.07□□□□□ -0.32
ABCA4P78363 RN7SL774P-201ENST00000577467 290 ntBASIC13.07□□□□□ -0.32
ABCA4P78363 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
ABCA4P78363 AC244157.2-201ENST00000616239 1006 ntBASIC13.07□□□□□ -0.32
ABCA4P78363 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.07□□□□□ -0.32
ABCA4P78363 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ABCA4P78363 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.07□□□□□ -0.32
ABCA4P78363 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 AC009093.2-202ENST00000620513 2079 ntBASIC13.07□□□□□ -0.32
ABCA4P78363 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
ABCA4P78363 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ABCA4P78363 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.07□□□□□ -0.32
ABCA4P78363 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
ABCA4P78363 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.06□□□□□ -0.32
ABCA4P78363 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.06□□□□□ -0.32
ABCA4P78363 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.06□□□□□ -0.32
ABCA4P78363 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ABCA4P78363 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.06□□□□□ -0.32
ABCA4P78363 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.06□□□□□ -0.32
ABCA4P78363 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 AC106820.3-201ENST00000561653 397 ntBASIC13.06□□□□□ -0.32
ABCA4P78363 ENPP7P14-201ENST00000621765 1040 ntBASIC13.06□□□□□ -0.32
ABCA4P78363 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.06□□□□□ -0.32
ABCA4P78363 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.06□□□□□ -0.32
ABCA4P78363 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.06□□□□□ -0.32
ABCA4P78363 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
ABCA4P78363 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ABCA4P78363 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms