Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN2P57739 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLDN2P57739 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLDN2P57739 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.97□□□□□ -0.01
CLDN2P57739 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CLDN2P57739 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN2P57739 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN2P57739 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
CLDN2P57739 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.96□□□□□ -0.01
CLDN2P57739 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CLDN2P57739 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.96□□□□□ -0.01
CLDN2P57739 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CLDN2P57739 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 MIR663B-201ENST00000408361 115 ntBASIC14.96□□□□□ -0.01
CLDN2P57739 AC079178.1-201ENST00000420915 656 ntBASIC14.96□□□□□ -0.01
CLDN2P57739 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN2P57739 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN2P57739 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 HIST2H2BB-201ENST00000449108 381 ntBASIC14.96□□□□□ -0.01
CLDN2P57739 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN2P57739 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.96□□□□□ -0.01
CLDN2P57739 FTLP10-202ENST00000505798 471 ntBASIC14.96□□□□□ -0.01
CLDN2P57739 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN2P57739 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CLDN2P57739 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN2P57739 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN2P57739 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CLDN2P57739 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN2P57739 AC244157.2-201ENST00000616239 1006 ntBASIC14.96□□□□□ -0.01
CLDN2P57739 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CLDN2P57739 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN2P57739 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
CLDN2P57739 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.96□□□□□ -0.01
CLDN2P57739 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.96□□□□□ -0.01
CLDN2P57739 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLDN2P57739 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN2P57739 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN2P57739 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLDN2P57739 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.96□□□□□ -0.02
CLDN2P57739 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.96□□□□□ -0.02
CLDN2P57739 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 FKBP4P6-201ENST00000457486 1332 ntBASIC14.95□□□□□ -0.02
CLDN2P57739 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN2P57739 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN2P57739 AP002414.2-201ENST00000591780 3365 ntBASIC14.95□□□□□ -0.02
CLDN2P57739 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN2P57739 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN2P57739 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN2P57739 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CLDN2P57739 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.95□□□□□ -0.02
CLDN2P57739 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CLDN2P57739 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
CLDN2P57739 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.95□□□□□ -0.02
CLDN2P57739 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.95□□□□□ -0.02
CLDN2P57739 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.95□□□□□ -0.02
CLDN2P57739 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.95□□□□□ -0.02
CLDN2P57739 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLDN2P57739 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDN2P57739 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms