Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GFRA1P56159 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GFRA1P56159 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.58□□□□□ -0.24
GFRA1P56159 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.58□□□□□ -0.24
GFRA1P56159 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.58□□□□□ -0.24
GFRA1P56159 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.58□□□□□ -0.24
GFRA1P56159 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.57□□□□□ -0.24
GFRA1P56159 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.57□□□□□ -0.24
GFRA1P56159 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.57□□□□□ -0.24
GFRA1P56159 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
GFRA1P56159 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.57□□□□□ -0.24
GFRA1P56159 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.57□□□□□ -0.24
GFRA1P56159 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.57□□□□□ -0.24
GFRA1P56159 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
GFRA1P56159 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
GFRA1P56159 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.57□□□□□ -0.24
GFRA1P56159 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 AL391280.1-201ENST00000506969 1062 ntBASIC13.57□□□□□ -0.24
GFRA1P56159 COX5BP1-201ENST00000507622 393 ntBASIC13.57□□□□□ -0.24
GFRA1P56159 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
GFRA1P56159 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.57□□□□□ -0.24
GFRA1P56159 RN7SL713P-201ENST00000582127 302 ntBASIC13.57□□□□□ -0.24
GFRA1P56159 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.57□□□□□ -0.24
GFRA1P56159 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.57□□□□□ -0.24
GFRA1P56159 AC012183.1-201ENST00000625197 499 ntBASIC13.57□□□□□ -0.24
GFRA1P56159 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
GFRA1P56159 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.57□□□□□ -0.24
GFRA1P56159 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
GFRA1P56159 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
GFRA1P56159 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
GFRA1P56159 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
GFRA1P56159 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.57□□□□□ -0.24
GFRA1P56159 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFRA1P56159 ZBED1P1-201ENST00000502364 1930 ntBASIC13.56□□□□□ -0.24
GFRA1P56159 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
GFRA1P56159 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
GFRA1P56159 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.56□□□□□ -0.24
GFRA1P56159 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.56□□□□□ -0.24
GFRA1P56159 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
GFRA1P56159 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.56□□□□□ -0.24
GFRA1P56159 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
GFRA1P56159 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 MIR1908-201ENST00000410394 80 ntBASIC13.56□□□□□ -0.24
GFRA1P56159 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.56□□□□□ -0.24
GFRA1P56159 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.56□□□□□ -0.24
GFRA1P56159 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.56□□□□□ -0.24
GFRA1P56159 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.56□□□□□ -0.24
GFRA1P56159 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.56□□□□□ -0.24
GFRA1P56159 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.56□□□□□ -0.24
GFRA1P56159 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.56□□□□□ -0.24
GFRA1P56159 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.56□□□□□ -0.24
GFRA1P56159 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.56□□□□□ -0.24
GFRA1P56159 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.56□□□□□ -0.24
GFRA1P56159 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.56□□□□□ -0.24
GFRA1P56159 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.56□□□□□ -0.24
GFRA1P56159 RN7SL560P-201ENST00000577943 264 ntBASIC13.56□□□□□ -0.24
GFRA1P56159 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.56□□□□□ -0.24
GFRA1P56159 AC073413.1-201ENST00000603927 732 ntBASIC13.56□□□□□ -0.24
GFRA1P56159 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFRA1P56159 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms