Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.97□□□□□ -0.01
LIMK1P53667 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
LIMK1P53667 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LIMK1P53667 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.97□□□□□ -0.01
LIMK1P53667 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.97□□□□□ -0.01
LIMK1P53667 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.97□□□□□ -0.01
LIMK1P53667 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 RPL13AP19-201ENST00000434320 584 ntBASIC14.97□□□□□ -0.01
LIMK1P53667 FGFR3P1-201ENST00000449999 601 ntBASIC14.97□□□□□ -0.01
LIMK1P53667 KRT18P66-201ENST00000452970 1269 ntBASIC14.97□□□□□ -0.01
LIMK1P53667 MARK2P5-201ENST00000507649 634 ntBASIC14.97□□□□□ -0.01
LIMK1P53667 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK1P53667 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK1P53667 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.97□□□□□ -0.01
LIMK1P53667 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.97□□□□□ -0.01
LIMK1P53667 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC14.97□□□□□ -0.01
LIMK1P53667 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.97□□□□□ -0.01
LIMK1P53667 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK1P53667 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK1P53667 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
LIMK1P53667 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.97□□□□□ -0.01
LIMK1P53667 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LIMK1P53667 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LIMK1P53667 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.97□□□□□ -0.01
LIMK1P53667 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.96□□□□□ -0.01
LIMK1P53667 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.96□□□□□ -0.01
LIMK1P53667 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
LIMK1P53667 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LIMK1P53667 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LIMK1P53667 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.96□□□□□ -0.01
LIMK1P53667 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.96□□□□□ -0.01
LIMK1P53667 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC14.96□□□□□ -0.01
LIMK1P53667 CHMP1AP1-201ENST00000445563 662 ntBASIC14.96□□□□□ -0.01
LIMK1P53667 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.96□□□□□ -0.01
LIMK1P53667 TUBB8P8-201ENST00000458717 1058 ntBASIC14.96□□□□□ -0.01
LIMK1P53667 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.96□□□□□ -0.01
LIMK1P53667 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.96□□□□□ -0.01
LIMK1P53667 AC073413.1-201ENST00000603927 732 ntBASIC14.96□□□□□ -0.01
LIMK1P53667 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.96□□□□□ -0.01
LIMK1P53667 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.96□□□□□ -0.01
LIMK1P53667 AC004923.1-202ENST00000642106 209 ntBASIC14.96□□□□□ -0.01
LIMK1P53667 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
LIMK1P53667 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.96□□□□□ -0.01
LIMK1P53667 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK1P53667 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LIMK1P53667 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LIMK1P53667 LRRC59-203ENST00000576448 1531 ntBASIC14.96□□□□□ -0.02
LIMK1P53667 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LIMK1P53667 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LIMK1P53667 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
LIMK1P53667 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LIMK1P53667 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.95□□□□□ -0.02
LIMK1P53667 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.95□□□□□ -0.02
LIMK1P53667 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
LIMK1P53667 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
LIMK1P53667 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK1P53667 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LIMK1P53667 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms