Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 OR2R1P-201ENST00000441404 914 ntBASIC16.69■□□□□ 0.26
LBX1P52954 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 RN7SL363P-201ENST00000482412 273 ntBASIC16.69■□□□□ 0.26
LBX1P52954 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
LBX1P52954 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 AC120498.7-201ENST00000562876 330 ntBASIC16.69■□□□□ 0.26
LBX1P52954 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.69■□□□□ 0.26
LBX1P52954 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC16.69■□□□□ 0.26
LBX1P52954 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC16.69■□□□□ 0.26
LBX1P52954 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LBX1P52954 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
LBX1P52954 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LBX1P52954 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC16.69■□□□□ 0.26
LBX1P52954 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.69■□□□□ 0.26
LBX1P52954 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.69■□□□□ 0.26
LBX1P52954 OR6D1P-202ENST00000641007 5290 ntBASIC16.69■□□□□ 0.26
LBX1P52954 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.68■□□□□ 0.26
LBX1P52954 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.68■□□□□ 0.26
LBX1P52954 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.68■□□□□ 0.26
LBX1P52954 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LBX1P52954 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
LBX1P52954 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
LBX1P52954 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 ALG1L15P-201ENST00000482834 794 ntBASIC16.68■□□□□ 0.26
LBX1P52954 ISL1-203ENST00000511384 981 ntTSL 5 BASIC16.68■□□□□ 0.26
LBX1P52954 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC16.68■□□□□ 0.26
LBX1P52954 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.68■□□□□ 0.26
LBX1P52954 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LBX1P52954 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC16.68■□□□□ 0.26
LBX1P52954 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LBX1P52954 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC16.68■□□□□ 0.26
LBX1P52954 RN7SL665P-201ENST00000578793 300 ntBASIC16.68■□□□□ 0.26
LBX1P52954 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.68■□□□□ 0.26
LBX1P52954 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC16.68■□□□□ 0.26
LBX1P52954 OR3A1-202ENST00000615105 966 ntBASIC16.68■□□□□ 0.26
LBX1P52954 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.68■□□□□ 0.26
LBX1P52954 AC079331.1-201ENST00000623200 1200 ntBASIC16.68■□□□□ 0.26
LBX1P52954 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.68■□□□□ 0.26
LBX1P52954 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC16.68■□□□□ 0.26
LBX1P52954 AC005865.2-202ENST00000635814 725 ntBASIC16.68■□□□□ 0.26
LBX1P52954 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LBX1P52954 AC078925.2-201ENST00000624013 1973 ntBASIC16.68■□□□□ 0.26
LBX1P52954 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LBX1P52954 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LBX1P52954 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LBX1P52954 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.67■□□□□ 0.26
LBX1P52954 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LBX1P52954 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.67■□□□□ 0.26
LBX1P52954 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LBX1P52954 AC139713.2-201ENST00000641328 2723 ntBASIC16.67■□□□□ 0.26
LBX1P52954 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
LBX1P52954 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LBX1P52954 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LBX1P52954 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LBX1P52954 KRT18P44-201ENST00000416086 1285 ntBASIC16.67■□□□□ 0.26
LBX1P52954 KRT18P4-201ENST00000422599 1288 ntBASIC16.67■□□□□ 0.26
LBX1P52954 HNRNPA1P25-201ENST00000422644 937 ntBASIC16.67■□□□□ 0.26
LBX1P52954 HMGA1P2-201ENST00000430198 324 ntBASIC16.67■□□□□ 0.26
LBX1P52954 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC16.67■□□□□ 0.26
LBX1P52954 RN7SL147P-201ENST00000487345 298 ntBASIC16.67■□□□□ 0.26
LBX1P52954 TMA16-204ENST00000508268 608 ntTSL 2 BASIC16.67■□□□□ 0.26
LBX1P52954 AC011431.1-201ENST00000512971 230 ntBASIC16.67■□□□□ 0.26
LBX1P52954 LY6E-215ENST00000523847 427 ntTSL 3 BASIC16.67■□□□□ 0.26
LBX1P52954 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.67■□□□□ 0.26
LBX1P52954 AC004801.1-201ENST00000549557 360 ntBASIC16.67■□□□□ 0.26
LBX1P52954 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.67■□□□□ 0.26
LBX1P52954 DERL2-206ENST00000572834 589 ntTSL 3 BASIC16.67■□□□□ 0.26
LBX1P52954 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms