Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.93□□□□□ -0.34
NKX2-5P52952 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-5P52952 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 AL020989.1-201ENST00000422979 469 ntBASIC12.93□□□□□ -0.34
NKX2-5P52952 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.93□□□□□ -0.34
NKX2-5P52952 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
NKX2-5P52952 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NKX2-5P52952 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.93□□□□□ -0.34
NKX2-5P52952 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-5P52952 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-5P52952 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-5P52952 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.93□□□□□ -0.34
NKX2-5P52952 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-5P52952 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-5P52952 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.93□□□□□ -0.34
NKX2-5P52952 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-5P52952 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.93□□□□□ -0.34
NKX2-5P52952 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
NKX2-5P52952 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.93□□□□□ -0.34
NKX2-5P52952 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-5P52952 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NKX2-5P52952 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NKX2-5P52952 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.93□□□□□ -0.34
NKX2-5P52952 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NKX2-5P52952 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.92□□□□□ -0.34
NKX2-5P52952 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX2-5P52952 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX2-5P52952 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-5P52952 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-5P52952 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-5P52952 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
NKX2-5P52952 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-5P52952 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-5P52952 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-5P52952 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-5P52952 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC12.92□□□□□ -0.34
NKX2-5P52952 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.92□□□□□ -0.34
NKX2-5P52952 POM121L14P-201ENST00000406100 1558 ntBASIC12.92□□□□□ -0.34
NKX2-5P52952 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.92□□□□□ -0.34
NKX2-5P52952 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.92□□□□□ -0.34
NKX2-5P52952 AC128676.1-201ENST00000454392 318 ntBASIC12.92□□□□□ -0.34
NKX2-5P52952 RASA4DP-201ENST00000460726 1199 ntBASIC12.92□□□□□ -0.34
NKX2-5P52952 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.92□□□□□ -0.34
NKX2-5P52952 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.92□□□□□ -0.34
NKX2-5P52952 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.92□□□□□ -0.34
NKX2-5P52952 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.92□□□□□ -0.34
NKX2-5P52952 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NKX2-5P52952 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.92□□□□□ -0.34
NKX2-5P52952 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-5P52952 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
NKX2-5P52952 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX2-5P52952 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
NKX2-5P52952 LINC00638-201ENST00000555578 2518 ntBASIC12.92□□□□□ -0.34
NKX2-5P52952 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX2-5P52952 MCU-204ENST00000536019 3224 ntTSL 2 BASIC12.92□□□□□ -0.34
NKX2-5P52952 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
NKX2-5P52952 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms