Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SRP9P49458 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 TREML5P-201ENST00000421694 576 ntBASIC13.59□□□□□ -0.23
SRP9P49458 CYMP-203ENST00000474680 1263 ntBASIC13.59□□□□□ -0.23
SRP9P49458 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.59□□□□□ -0.23
SRP9P49458 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.59□□□□□ -0.23
SRP9P49458 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.59□□□□□ -0.23
SRP9P49458 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.59□□□□□ -0.23
SRP9P49458 SPDYE12P-201ENST00000618416 771 ntBASIC13.59□□□□□ -0.23
SRP9P49458 MIR6069-201ENST00000620069 79 ntBASIC13.59□□□□□ -0.23
SRP9P49458 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.59□□□□□ -0.23
SRP9P49458 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SRP9P49458 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SRP9P49458 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SRP9P49458 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.59□□□□□ -0.23
SRP9P49458 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
SRP9P49458 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
SRP9P49458 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.59□□□□□ -0.23
SRP9P49458 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SRP9P49458 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SRP9P49458 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.59□□□□□ -0.23
SRP9P49458 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SRP9P49458 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SRP9P49458 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SRP9P49458 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
SRP9P49458 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.23
SRP9P49458 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.23
SRP9P49458 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SRP9P49458 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
SRP9P49458 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.58□□□□□ -0.24
SRP9P49458 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.58□□□□□ -0.24
SRP9P49458 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.58□□□□□ -0.24
SRP9P49458 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
SRP9P49458 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.58□□□□□ -0.24
SRP9P49458 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.58□□□□□ -0.24
SRP9P49458 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.58□□□□□ -0.24
SRP9P49458 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.58□□□□□ -0.24
SRP9P49458 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.58□□□□□ -0.24
SRP9P49458 DUX4L27-201ENST00000554796 1261 ntBASIC13.58□□□□□ -0.24
SRP9P49458 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.58□□□□□ -0.24
SRP9P49458 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.58□□□□□ -0.24
SRP9P49458 AL138828.2-201ENST00000615812 383 ntBASIC13.58□□□□□ -0.24
SRP9P49458 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.58□□□□□ -0.24
SRP9P49458 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.58□□□□□ -0.24
SRP9P49458 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.58□□□□□ -0.24
SRP9P49458 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SRP9P49458 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.58□□□□□ -0.24
SRP9P49458 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SRP9P49458 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.58□□□□□ -0.24
SRP9P49458 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.58□□□□□ -0.24
SRP9P49458 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SRP9P49458 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SRP9P49458 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SRP9P49458 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SRP9P49458 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.57□□□□□ -0.24
SRP9P49458 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
SRP9P49458 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SRP9P49458 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.57□□□□□ -0.24
SRP9P49458 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms