Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CSNK1A1P48729 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CSNK1A1P48729 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CSNK1A1P48729 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.58□□□□□ -0.23
CSNK1A1P48729 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 SOCS2P1-201ENST00000417727 557 ntBASIC13.58□□□□□ -0.24
CSNK1A1P48729 AC098850.1-201ENST00000419919 790 ntBASIC13.58□□□□□ -0.24
CSNK1A1P48729 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 API5-211ENST00000534695 560 ntTSL 5 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 TMEM261P1-201ENST00000604899 340 ntBASIC13.58□□□□□ -0.24
CSNK1A1P48729 AC008494.3-201ENST00000606615 944 ntBASIC13.58□□□□□ -0.24
CSNK1A1P48729 BX539320.1-201ENST00000623759 877 ntBASIC13.58□□□□□ -0.24
CSNK1A1P48729 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 REXO1L2P-201ENST00000425429 2069 ntBASIC13.58□□□□□ -0.24
CSNK1A1P48729 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 AC093525.8-201ENST00000624099 1342 ntBASIC13.58□□□□□ -0.24
CSNK1A1P48729 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 LINC00528-201ENST00000600723 2160 ntBASIC13.58□□□□□ -0.24
CSNK1A1P48729 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CSNK1A1P48729 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CSNK1A1P48729 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 AL359258.3-201ENST00000622910 2331 ntBASIC13.57□□□□□ -0.24
CSNK1A1P48729 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 AL645937.2-201ENST00000396808 931 ntBASIC13.57□□□□□ -0.24
CSNK1A1P48729 NUS1P3-201ENST00000423502 862 ntBASIC13.57□□□□□ -0.24
CSNK1A1P48729 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 HMGN1P19-201ENST00000436976 333 ntBASIC13.57□□□□□ -0.24
CSNK1A1P48729 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 AC190387.1-201ENST00000551683 408 ntBASIC13.57□□□□□ -0.24
CSNK1A1P48729 AL359711.2-201ENST00000563105 872 ntBASIC13.57□□□□□ -0.24
CSNK1A1P48729 AC092364.2-202ENST00000597012 1073 ntBASIC13.57□□□□□ -0.24
CSNK1A1P48729 AC133539.2-201ENST00000604757 467 ntBASIC13.57□□□□□ -0.24
CSNK1A1P48729 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CSNK1A1P48729 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 AL158070.2-201ENST00000623713 1621 ntBASIC13.57□□□□□ -0.24
CSNK1A1P48729 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CSNK1A1P48729 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms