Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.52■□□□□ 0.56
PDE6BP35913 AC006449.5-201ENST00000610658 2098 ntBASIC18.52■□□□□ 0.56
PDE6BP35913 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.52■□□□□ 0.56
PDE6BP35913 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6BP35913 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6BP35913 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDE6BP35913 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
PDE6BP35913 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDE6BP35913 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PDE6BP35913 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.52■□□□□ 0.55
PDE6BP35913 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.51■□□□□ 0.55
PDE6BP35913 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.51■□□□□ 0.55
PDE6BP35913 FRMPD2B-201ENST00000431305 1347 ntBASIC18.51■□□□□ 0.55
PDE6BP35913 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.51■□□□□ 0.55
PDE6BP35913 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PDE6BP35913 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PDE6BP35913 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.51■□□□□ 0.55
PDE6BP35913 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.51■□□□□ 0.55
PDE6BP35913 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC18.51■□□□□ 0.55
PDE6BP35913 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.51■□□□□ 0.55
PDE6BP35913 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.51■□□□□ 0.55
PDE6BP35913 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.51■□□□□ 0.55
PDE6BP35913 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.51■□□□□ 0.55
PDE6BP35913 ALG3P1-201ENST00000508806 1114 ntBASIC18.51■□□□□ 0.55
PDE6BP35913 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.51■□□□□ 0.55
PDE6BP35913 MIR3677-201ENST00000578964 60 ntBASIC18.51■□□□□ 0.55
PDE6BP35913 MIR4649-201ENST00000582839 64 ntBASIC18.51■□□□□ 0.55
PDE6BP35913 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.51■□□□□ 0.55
PDE6BP35913 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.51■□□□□ 0.55
PDE6BP35913 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PDE6BP35913 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC18.51■□□□□ 0.55
PDE6BP35913 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 AC012508.2-201ENST00000567613 1472 ntBASIC18.51■□□□□ 0.55
PDE6BP35913 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDE6BP35913 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.51■□□□□ 0.55
PDE6BP35913 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.5■□□□□ 0.55
PDE6BP35913 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PDE6BP35913 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.5■□□□□ 0.55
PDE6BP35913 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.5■□□□□ 0.55
PDE6BP35913 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDE6BP35913 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 PCDHA14-201ENST00000506751 2298 ntBASIC18.5■□□□□ 0.55
PDE6BP35913 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
PDE6BP35913 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC18.5■□□□□ 0.55
PDE6BP35913 LINC01783-202ENST00000614408 828 ntBASIC18.5■□□□□ 0.55
PDE6BP35913 BX284668.2-205ENST00000619677 828 ntBASIC18.5■□□□□ 0.55
PDE6BP35913 AC027601.3-201ENST00000622907 509 ntBASIC18.5■□□□□ 0.55
PDE6BP35913 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 REXO1L4P-201ENST00000605109 1937 ntBASIC18.5■□□□□ 0.55
PDE6BP35913 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.5■□□□□ 0.55
PDE6BP35913 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDE6BP35913 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
PDE6BP35913 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.5■□□□□ 0.55
PDE6BP35913 AL603832.2-201ENST00000566195 2125 ntBASIC18.5■□□□□ 0.55
PDE6BP35913 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.5■□□□□ 0.55
PDE6BP35913 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDE6BP35913 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PDE6BP35913 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
PDE6BP35913 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDE6BP35913 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
PDE6BP35913 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PDE6BP35913 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.49■□□□□ 0.55
PDE6BP35913 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC18.49■□□□□ 0.55
PDE6BP35913 AC025271.4-201ENST00000621477 1726 ntBASIC18.49■□□□□ 0.55
PDE6BP35913 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
PDE6BP35913 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.49■□□□□ 0.55
PDE6BP35913 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDE6BP35913 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PDE6BP35913 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms