Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT9P35527 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
KRT9P35527 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
KRT9P35527 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
KRT9P35527 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
KRT9P35527 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT9P35527 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT9P35527 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
KRT9P35527 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
KRT9P35527 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
KRT9P35527 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
KRT9P35527 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KRT9P35527 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT9P35527 AC241585.1-201ENST00000433527 519 ntBASIC16.7■□□□□ 0.26
KRT9P35527 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT9P35527 AC074044.1-201ENST00000609673 707 ntBASIC16.7■□□□□ 0.26
KRT9P35527 AF228730.6-201ENST00000641497 218 ntBASIC16.7■□□□□ 0.26
KRT9P35527 AC084121.3-201ENST00000641716 218 ntBASIC16.7■□□□□ 0.26
KRT9P35527 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
KRT9P35527 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
KRT9P35527 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
KRT9P35527 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.7■□□□□ 0.26
KRT9P35527 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KRT9P35527 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC16.7■□□□□ 0.26
KRT9P35527 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
KRT9P35527 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
KRT9P35527 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
KRT9P35527 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT9P35527 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT9P35527 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT9P35527 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT9P35527 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT9P35527 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.69■□□□□ 0.26
KRT9P35527 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT9P35527 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT9P35527 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.69■□□□□ 0.26
KRT9P35527 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT9P35527 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT9P35527 AC106028.4-201ENST00000614509 607 ntBASIC16.69■□□□□ 0.26
KRT9P35527 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
KRT9P35527 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
KRT9P35527 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT9P35527 AC041040.2-201ENST00000622926 2899 ntBASIC16.69■□□□□ 0.26
KRT9P35527 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
KRT9P35527 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
KRT9P35527 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT9P35527 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
KRT9P35527 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT9P35527 AC104581.4-201ENST00000623126 3052 ntBASIC16.68■□□□□ 0.26
KRT9P35527 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT9P35527 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT9P35527 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT9P35527 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT9P35527 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
KRT9P35527 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT9P35527 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms