Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC15.32■□□□□ 0.04
LSP1P33241 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC15.32■□□□□ 0.04
LSP1P33241 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.32■□□□□ 0.04
LSP1P33241 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LSP1P33241 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.31■□□□□ 0.04
LSP1P33241 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LSP1P33241 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.31■□□□□ 0.04
LSP1P33241 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.31■□□□□ 0.04
LSP1P33241 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 TSN-212ENST00000536142 3328 ntTSL 2 BASIC15.31■□□□□ 0.04
LSP1P33241 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LSP1P33241 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.31■□□□□ 0.04
LSP1P33241 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.31■□□□□ 0.04
LSP1P33241 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.31■□□□□ 0.04
LSP1P33241 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.31■□□□□ 0.04
LSP1P33241 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LSP1P33241 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LSP1P33241 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LSP1P33241 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LSP1P33241 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LSP1P33241 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.31■□□□□ 0.04
LSP1P33241 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LSP1P33241 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.31■□□□□ 0.04
LSP1P33241 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
LSP1P33241 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.31■□□□□ 0.04
LSP1P33241 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.31■□□□□ 0.04
LSP1P33241 AGGF1P1-201ENST00000509500 2073 ntBASIC15.31■□□□□ 0.04
LSP1P33241 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSP1P33241 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.31■□□□□ 0.04
LSP1P33241 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.31■□□□□ 0.04
LSP1P33241 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.31■□□□□ 0.04
LSP1P33241 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15.3■□□□□ 0.04
LSP1P33241 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LSP1P33241 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.3■□□□□ 0.04
LSP1P33241 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LSP1P33241 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LSP1P33241 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.3■□□□□ 0.04
LSP1P33241 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 TSPY19P-201ENST00000418461 509 ntBASIC15.3■□□□□ 0.04
LSP1P33241 AL450487.1-201ENST00000426799 995 ntBASIC15.3■□□□□ 0.04
LSP1P33241 TSPY18P-201ENST00000441642 509 ntBASIC15.3■□□□□ 0.04
LSP1P33241 TCAM1P-207ENST00000485295 1537 ntBASIC15.3■□□□□ 0.04
LSP1P33241 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.3■□□□□ 0.04
LSP1P33241 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.3■□□□□ 0.04
LSP1P33241 OS9-218ENST00000551035 2246 ntTSL 2 BASIC15.3■□□□□ 0.04
LSP1P33241 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.3■□□□□ 0.04
LSP1P33241 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
LSP1P33241 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.3■□□□□ 0.04
LSP1P33241 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.3■□□□□ 0.04
LSP1P33241 MIR1199-201ENST00000621445 119 ntBASIC15.3■□□□□ 0.04
LSP1P33241 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
LSP1P33241 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
LSP1P33241 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
LSP1P33241 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSP1P33241 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.3■□□□□ 0.04
LSP1P33241 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC15.29■□□□□ 0.04
LSP1P33241 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
LSP1P33241 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC15.29■□□□□ 0.04
LSP1P33241 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LSP1P33241 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSP1P33241 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.29■□□□□ 0.04
LSP1P33241 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms