Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC20.87■□□□□ 0.93
CPS1P31327 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPS1P31327 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CPS1P31327 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CPS1P31327 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC20.87■□□□□ 0.93
CPS1P31327 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC20.87■□□□□ 0.93
CPS1P31327 AC140113.1-201ENST00000603467 169 ntBASIC20.87■□□□□ 0.93
CPS1P31327 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
CPS1P31327 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPS1P31327 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC20.87■□□□□ 0.93
CPS1P31327 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC20.87■□□□□ 0.93
CPS1P31327 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPS1P31327 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CPS1P31327 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPS1P31327 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.86■□□□□ 0.93
CPS1P31327 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPS1P31327 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPS1P31327 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.86■□□□□ 0.93
CPS1P31327 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPS1P31327 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC20.86■□□□□ 0.93
CPS1P31327 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPS1P31327 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.86■□□□□ 0.93
CPS1P31327 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPS1P31327 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
CPS1P31327 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CPS1P31327 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC20.86■□□□□ 0.93
CPS1P31327 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC20.86■□□□□ 0.93
CPS1P31327 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC20.86■□□□□ 0.93
CPS1P31327 AC131206.1-201ENST00000538078 1211 ntBASIC20.86■□□□□ 0.93
CPS1P31327 AC010632.2-201ENST00000588369 1224 ntBASIC20.86■□□□□ 0.93
CPS1P31327 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CPS1P31327 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC20.86■□□□□ 0.93
CPS1P31327 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.86■□□□□ 0.93
CPS1P31327 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPS1P31327 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPS1P31327 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.86■□□□□ 0.93
CPS1P31327 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPS1P31327 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CPS1P31327 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPS1P31327 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPS1P31327 AL359258.3-201ENST00000622910 2331 ntBASIC20.86■□□□□ 0.93
CPS1P31327 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.86■□□□□ 0.93
CPS1P31327 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPS1P31327 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPS1P31327 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPS1P31327 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.85■□□□□ 0.93
CPS1P31327 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPS1P31327 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CPS1P31327 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC20.85■□□□□ 0.93
CPS1P31327 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CPS1P31327 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPS1P31327 MIR566-201ENST00000385187 94 ntBASIC20.85■□□□□ 0.93
CPS1P31327 RN7SKP109-201ENST00000410592 316 ntBASIC20.85■□□□□ 0.93
CPS1P31327 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC20.85■□□□□ 0.93
CPS1P31327 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC20.85■□□□□ 0.93
CPS1P31327 MIR6746-201ENST00000620971 63 ntBASIC20.85■□□□□ 0.93
CPS1P31327 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC20.85■□□□□ 0.93
CPS1P31327 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPS1P31327 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPS1P31327 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPS1P31327 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPS1P31327 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPS1P31327 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPS1P31327 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CPS1P31327 PCDHB19P-201ENST00000570871 2371 ntBASIC20.85■□□□□ 0.93
CPS1P31327 LILRP1-201ENST00000444199 1370 ntBASIC20.85■□□□□ 0.93
CPS1P31327 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.85■□□□□ 0.93
CPS1P31327 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CPS1P31327 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.85■□□□□ 0.93
CPS1P31327 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.85■□□□□ 0.93
CPS1P31327 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPS1P31327 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.84■□□□□ 0.93
CPS1P31327 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC20.84■□□□□ 0.93
CPS1P31327 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPS1P31327 HLA-DPA2-205ENST00000433582 733 ntBASIC20.84■□□□□ 0.93
CPS1P31327 CICP12-201ENST00000455801 843 ntBASIC20.84■□□□□ 0.93
CPS1P31327 GDNF-207ENST00000515058 764 ntTSL 5 BASIC20.84■□□□□ 0.93
CPS1P31327 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CPS1P31327 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
CPS1P31327 AC006483.2-201ENST00000609813 515 ntBASIC20.84■□□□□ 0.93
CPS1P31327 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
CPS1P31327 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.84■□□□□ 0.93
CPS1P31327 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPS1P31327 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPS1P31327 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
CPS1P31327 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPS1P31327 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPS1P31327 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC20.84■□□□□ 0.93
CPS1P31327 AC023090.2-201ENST00000625182 2110 ntBASIC20.84■□□□□ 0.93
CPS1P31327 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPS1P31327 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CPS1P31327 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CPS1P31327 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CPS1P31327 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPS1P31327 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CPS1P31327 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC20.83■□□□□ 0.93
CPS1P31327 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CPS1P31327 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC20.83■□□□□ 0.93
CPS1P31327 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC20.83■□□□□ 0.93
CPS1P31327 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms